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李俊桦

李俊桦(lijunhua@genomics.cn),研究员,深圳华大生命科学研究院欧洲分院院长,深圳市未知病原体应急检测重点实验室主任;中国生物物理学会肠道菌群分会委员,中国微生物学会病毒学专业委员会青年委员,学术期刊Microbiology Spectrum编委;ISO/TC 276/SC 1/WG 2、SC 1/WG 3、ISO/TC 276/WG 3、WG4工作组专家成员;科技部、国自然基金委、广东省科技厅基金项目和人才项目评审专家库成员。主导建立了人肠道微生物组参考基因集,并开展微生物组与代谢性疾病相关研究,成果发表在《自然生物技术》《自然医学》等期刊;主导开发了新冠病毒高效测序方法,并基于宏转录组测序开展威胁人类新病原发现及监测,成果发表在《自然生态学与进化》《微生物组》等期刊;参与起草发布宏基因组测序相关国家标准两项;累计在《自然》《自然生物技术》等期刊发表论文70余篇,其中以第一作者或通讯作者(含共同)发表文章40余篇,获授权发明专利8项,授权软件著作权11项;入选科睿唯安(Clarivate)2019年度和2020年度全球“高被引科学家”;2021年中国产学研合作创新成果奖一等奖第五完成人。

研究方向:聚焦微生物组、病毒组、病原组研究及相关生物信息分析技术研发,致力于应用微生物组学、培养组学、生物信息学、合成生物学等创新技术,主要研究方向有:

1.研究人体微生物组、病毒组与疾病的关系

2.挖掘潜在新病原体,并研究其组学特征

3.研发新型疾病干预手段

现任岗位:华大研究院 欧洲分院 院长

教育背景:华南理工大学 微生物学 博士

参与项目:

1.MetaHIT

2.2011 Germany E. coli O104:H4 outbreak

3.Serial projects of studying the interactions between the Gut Microbiome and Metabolic Diseases

4.COVID-19 virus genome sequencing and variant surveillance

5.Serial projects of Virome Exploration and Pathogen Genomics

论文:

1.Wang, T., Shi, Z., Ren, H., Xu, M., Lu, J., Yang, F., Ye, C., Wu, K., Chen, M., Xu, X., Liu, D., Kong, L., Zheng, R., Zheng, J., Li, M., Xu, Y., Zhao, Z., Chen, Y., Yang, H., … Wang, W. (2024). Divergent age-associated and metabolism-associated gut microbiome signatures modulate cardiovascular disease risk. Nature Medicine. https://doi.org/10.1038/s41591-024-03038-y 

2.Wang, D., Yang, X., Ren, Z., Hu, B., Zhao, H., Yang, K., Shi, P., Zhang, Z., Feng, Q., Nawenja, C. V., Obanda, V., Robert, K., Nalikka, B., Waruhiu, C. N., Ochola, G. O., Onyuok, S. O., Ochieng, H., Li, B., Zhu, Y., … Shi, Z.-L. (2024). Substantial viral diversity in bats and rodents from East Africa: insights into evolution, recombination, and cocirculation. Microbiome, 12(1), 72. https://doi.org/10.1186/s40168-024-01782-4 

3.Wang, D., Yang, X., Ren, Z., Hu, B., Zhao, H., Yang, K., Shi, P., Zhang, Z., Feng, Q., Nawenja, C. V., Obanda, V., Robert, K., Nalikka, B., Waruhiu, C. N., Ochola, G. O., Onyuok, S. O., Ochieng, H., Li, B., Zhu, Y., … Shi, Z.-L. (2024). Substantial viral diversity in bats and rodents from East Africa: insights into evolution, recombination, and cocirculation. Microbiome, 12(1), 72. https://doi.org/10.1186/s40168-024-01782-4 

4.Ou, Z., Lin, S., Qiu, J., Ding, W., Ren, P., Chen, D., Wang, J., Tong, Y., Wu, D., Chen, A., Deng, Y., Cheng, M., Peng, T., Lu, H., Yang, H., Wang, J., Jin, X., Ma, D., Xu, X., … Wu, P. (2022). Single-Nucleus RNA Sequencing and Spatial Transcriptomics Reveal the Immunological Microenvironment of Cervical Squamous Cell Carcinoma. Advanced Science, 9(29), 2203040. https://doi.org/10.1002/advs.202203040

5.Li, J., Yang, F., Xiao, M., & Li, A. (2022). Advances and challenges in cataloging the human gut virome. Cell Host & Microbe, 30(7), 908–916. https://doi.org/10.1016/j.chom.2022.06.003

6.Zhong, H., Wang, Y., Shi, Z., Zhang, L., Ren, H., He, W., Zhang, Z., Zhu, A., Zhao, J. J., Xiao, F., Yang, F., Liang, T., Ye, F., Zhong, B., Ruan, S., Gan, M., Zhu, J., Li, F. F., Li, F. F., … Zhao, J. J. (2021). Characterization of respiratory microbial dysbiosis in hospitalized COVID-19 patients. Cell Discovery, 7(1), 23. https://doi.org/10.1038/s41421-021-00257-2

7.Zhang, X., Zhong, H., Li, Y., Shi, Z., Ren, H., Zhang, Z., Zhou, X., Tang, S., Han, X., Lin, Y., Yang, F., Wang, D., Fang, C., Fu, Z., Wang, L., Zhu, S., Hou, Y., Xu, X., Yang, H., … Ji, L. (2021). Sex- and age-related trajectories of the adult human gut microbiota shared across populations of different ethnicities. Nature Aging, 1(1), 87–100. https://doi.org/10.1038/s43587-020-00014-2

8.Xiao, M., Liu, X., Ji, J., Li, M., Li, J., Yang, L., Sun, W., Ren, P., Yang, G., Zhao, J., Liang, T., Ren, H., Chen, T., Zhong, H., Song, W., Wang, Y., Deng, Z., Zhao, Y., Ou, Z., … Li, J. (2020). Multiple approaches for massively parallel sequencing of SARS-CoV-2 genomes directly from clinical samples. Genome Medicine, 12(1), 57. https://doi.org/10.1186/s13073-020-00751-4

9.Wang, Y., Wang, D., Zhang, L., Sun, W., Zhang, Z., Chen, W., Zhu, A., Huang, Y., Xiao, F., Yao, J., Gan, M., Li, F., Luo, L., Huang, X., Zhang, Y., Wong, S., Cheng, X., Ji, J., Ou, Z., … Zhao, J. (2021). Intra-host variation and evolutionary dynamics of SARS-CoV-2 populations in COVID-19 patients. Genome Medicine, 13(1), 30. https://doi.org/10.1186/s13073-021-00847-5 

10.Li, J., Jia, H., Cai, X., Zhong, H., Feng, Q., Sunagawa, S., Arumugam, M., Kultima, J. R., Prifti, E., Nielsen, T., Juncker, A. S., Manichanh, C., Chen, B., Zhang, W., Levenez, F., Wang, J., Xu, X., Xiao, L., Liang, S., … Wang, J. (2014). An integrated catalog of reference genes in the human gut microbiome. Nature Biotechnology, 32(8), 834–841. https://doi.org/10.1038/nbt.2942

Google scholar 链接:https://scholar.google.com/citations?user=808xo48AAAAJ&hl=en 

WOS 链接:https://www.webofscience.com/wos/author/record/AAG-3919-2019 

ORCID 链接:https://orcid.org/0000-0001-6784-1873 

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